scDiagnostics: systematic assessment of cell type annotation in single-cell transcriptomics data

Anthony Christidis, Andrew Ghazi, Smriti Chawla, Nitesh Turaga, Ludwig Geistlinger, Robert Gentleman

Briefings in Bioinformatics

DOI Bioconductor Source

RNA biomarkers from proximal liquid biopsy for diagnosis of ovarian cancer

Pieter Mestdagh, Elke Hulstaert, Keren Levanon, Annelien Morlion, Stefan Van Aelst, Anthony Christidis, et al.

Neoplasia

DOI

Objective-Driven Ensembles: Bridging the Gap Between Interpretable Sparsity and Algorithmic PredictionUnder review

Anthony Christidis, Stefan Van Aelst, Ruben Zamar

Manuscript under review

arXiv Reproducibility code

Fast and Scalable Cellwise-Robust Ensembles for High-Dimensional DataUnder review

Anthony Christidis, Jeyshinee Pyneeandee, Gabriela Cohen-Freue

Manuscript under review

arXiv srlars on CRAN Simulations

Fast Robust Regression via Robust Orthogonal Block UpdatesUnder review

Anthony Christidis, Matías Salibián-Barrera

Manuscript under review

arXiv Package & reproducibility pipeline

Robust Multi-Model Subset Selection

Anthony Christidis, Gabriela Cohen-Freue

Journal of Computational and Graphical Statistics

DOI RMSS on CRAN

Data-driven logistic regression ensembles with applications in genomics

Anthony Christidis, Stefan Van Aelst, Ruben Zamar

Advances in Data Analysis and Classification

DOI SplitGLM on CRAN

Multi-model subset selection

Anthony Christidis, Stefan Van Aelst, Ruben Zamar

Computational Statistics & Data Analysis

DOI PSGD on CRAN

RPESE: Risk and Performance Estimators Standard Errors with Serially Dependent Data

Anthony Christidis, R. Doug Martin

The R Journal

DOI RPESE on CRAN

Split Regularized Regression

Anthony Christidis, Laks Lakshmanan, Ezequiel Smucler, Ruben Zamar

Technometrics

DOI SplitReg on CRAN

A data-driven ensemble framework for modeling high-dimensional data: theory, methods, algorithms, and applications

Anthony Christidis · Supervised by Ruben Zamar and Stefan Van Aelst

PhD dissertation, University of British Columbia